![](https://github.com/rnabioco/valr/raw/HEAD/man/figures/logo.png)
valr - Genome Interval Arithmetic
Read and manipulate genome intervals and signals. Provides functionality similar to command-line tool suites within R, enabling interactive analysis and visualization of genome-scale data. Riemondy et al. (2017) <doi:10.12688/f1000research.11997.1>.
Last updated 8 days ago
bedtoolsgenomeinterval-arithmetic
87 stars 4.35 score 93 dependencies![](https://github.com/bioc/raer/raw/HEAD/man/figures/logo.png)
raer - RNA editing tools in R
Toolkit for identification and statistical testing of RNA editing signals from within R. Provides support for identifying sites from bulk-RNA and single cell RNA-seq datasets, and general methods for extraction of allelic read counts from alignment files. Facilitates annotation and exploratory analysis of editing signals using Bioconductor packages and resources.
Last updated 10 days ago
multiplecomparisonrnaseqsinglecellsequencingcoverageepitranscriptomicsfeatureextractionannotationalignment
7 stars 2.09 score 70 dependencies